June 1, 2026 | NDIS

NDIS Employer Compliance: Fair Work Underpayment Risks (FY 2027)

Key Takeaways

The Fair Work Ombudsman (FWO) has placed NDIS providers under intense scrutiny. The complexity of the SCHADS Award, combined with decentralized and irregular shift work, creates a high risk of payroll errors. As we enter the 2026–27 financial year (FY 2027), employers must proactively audit their payroll systems. This guide reviews the major compliance risks under the Fair Work Act and details how to protect your organization from underpayment claims.

1. Why the NDIS Sector is a Fair Work Priority

The disability support sector is characterized by casual labor, irregular shift times, and multiple allowance triggers. The FWO's audits of disability support businesses frequently uncover systematic underpayments. Often, these errors are not malicious; they stem from manual bookkeeping processes, misinterpreting award clauses, or poorly configured payroll software. However, under the Fair Work Act, a lack of awareness is not a valid legal defense.

2. Key Payroll Underpayment Risks

Ensure your payroll system accounts for these high-risk areas:

3. Personal Director Liabilities and Wage Theft

Australia’s Fair Work legislation has introduced criminal penalties for intentional wage theft, including substantial fines and potential imprisonment. Furthermore, the FWO can hold directors personally liable for underpayments under "accessorial liability" provisions. If a director knows or should have known that employees were being underpaid, they can be prosecuted personally, independent of the company structure.

4. Establishing a Payroll Control Framework

To mitigate these risks in FY 2027, implement the following control framework:

  1. Independent Award Review: Engage an HR consultant or specialized accountant to audit your payroll settings in Xero against the SCHADS Award.
  2. Automated Rostering: Use software (e.g., Tanda, Deputy, ShiftCare) with built-in SCHADS Award interpretation to calculate pay rates, penalties, and allowances based on worker time logs.
  3. Regular Reconciliation: Reconcile your timesheets against client invoices monthly to ensure the hours claimed in your general ledger match the hours paid to staff.
  4. Single Touch Payroll (STP) Audits: Ensure all allowances, overtime, and ordinary hours are mapped to the correct STP Phase 2 categories in Xero before lodging pay runs with the ATO.

⚠️ Compliance Alert: The minimum superannuation rate rises to 12.0% on July 1, 2026. Ensure this is applied to all pay runs. Any unpaid or late superannuation must be reported via the Superannuation Guarantee Charge (SGC) portal, which carries non-deductible interest and admin fees.

Protect Your NDIS Business from Payroll Risks

Our experienced payroll accountants audit your award settings, clean up Single Touch Payroll (STP) structures, and manage your weekly payroll runs securely.

Book a Payroll Audit